BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C04SP1|AL425827
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1015 1545 0.0
3x_Contig1806 903 0.0
3x_Contig1745 355 7e-98
>3x_Contig1015
Length = 4152
Score = 1545 bits (779), Expect = 0.0
Identities = 780/781 (99%)
Strand = Plus / Minus
Query: 1 gatcgtttgttcttgctggcaacgtcatatcttccctatcatggccctcagattcccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3940 gatcgtttgttcttgctggcaacgtcatatcttccctatcatggccctcagattcccatt 3881
Query: 61 cagcattcaaaccgatgcataaaatggctttatcatgagcggctgcaagctttgctgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3880 cagcattcaaaccgatgcataaaatggctttatcatgagcggctgcaagctttgctgctt 3821
Query: 121 tcttgatttcctcatctgcatcaatagctttggtgacaccaacctgaagagcaccagatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3820 tcttgatttcctcatctgcatcaatagctttggtgacaccaacctgaagagcaccagatc 3761
Query: 181 cgaattcactcaccaactcgcttgttggaccagaaccatattcgattctgactttatacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3760 cgaattcactcaccaactcgcttgttggaccagaaccatattcgattctgactttatacg 3701
Query: 241 ctttacccttttgtaaagtaacagtcttggtcttttcaatggtaccggcaccgaaacaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3700 ctttacccttttgtaaagtaacagtcttggtcttttcaatggtaccggcaccgaaacaga 3641
Query: 301 aatcaccactgacttggcccttcctctgatcaatcaataattcgtcgtctaagtacaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3640 aatcaccactgacttggcccttcctctgatcaatcaataattcgtcgtctaagtacaaaa 3581
Query: 361 caccggtaccgaaaacctgcaaaccaaatatgtagtcggcatcttcttcaggagtgaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3580 caccggtaccgaaaacctgcaaaccaaatatgtagtcggcatcttcttcaggagtgaagt 3521
Query: 421 aaccttctaatgtgatgtaaaatattgggttagtggtgtcaattttttcatgcttgadat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3520 aaccttctaatgtgatgtaaaatattgggttagtggtgtcaattttttcatgcttgaaat 3461
Query: 481 cgaaaagcaagttgaaagagtgtttaaaggtagcaacatggaatggagattcatcctttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3460 cgaaaagcaagttgaaagagtgtttaaaggtagcaacatggaatggagattcatcctttg 3401
Query: 541 ctctcttttcaacgggctcactgtagaaggaaccggtagcacctgcattgtctccctctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3400 ctctcttttcaacgggctcactgtagaaggaaccggtagcacctgcattgtctccctctg 3341
Query: 601 ctggttttgagggatcgactaccagttgctcaattaaattagataaagtcttatgagact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3340 ctggttttgagggatcgactaccagttgctcaattaaattagataaagtcttatgagact 3281
Query: 661 ctgccccaattgtgtatggtacttctttgcccactttcttaacaatcccttcgtaaggcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3280 ctgccccaattgtgtatggtacttctttgcccactttcttaacaatcccttcgtaaggcg 3221
Query: 721 aaataacatagtaagaattcacggaggcagaaccacctccagaagatgcctttgctttgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3220 aaataacatagtaagaattcacggaggcagaaccacctccagaagatgcctttgctttgg 3161
Query: 781 c 781
|
Sbjct: 3160 c 3160
>3x_Contig1806
Length = 53694
Score = 903 bits (455), Expect = 0.0
Identities = 699/781 (89%)
Strand = Plus / Minus
Query: 1 gatcgtttgttcttgctggcaacgtcatatcttccctatcatggccctcagattcccatt 60
|||||||||||||| ||||||| |||||||||||||||||||| || |||||||||||||
Sbjct: 51984 gatcgtttgttcttcctggcaaagtcatatcttccctatcatgaccttcagattcccatt 51925
Query: 61 cagcattcaaaccgatgcataaaatggctttatcatgagcggctgcaagctttgctgctt 120
| || |||||||| || ||||||||||||||||| ||| | || ||||| |||||||| |
Sbjct: 51924 ctgcgttcaaaccaatacataaaatggctttatcgtgacccgcagcaagttttgctgcct 51865
Query: 121 tcttgatttcctcatctgcatcaatagctttggtgacaccaacctgaagagcaccagatc 180
|||||||||||||||||||||||||||| || | ||||||||||| |||||||||| ||
Sbjct: 51864 tcttgatttcctcatctgcatcaatagcctttgcaacaccaacctggagagcaccagctc 51805
Query: 181 cgaattcactcaccaactcgcttgttggaccagaaccatattcgattctgactttatacg 240
|||||||||| |||| | ||| ||||| ||||| |||||||||||||||||||||||||
Sbjct: 51804 cgaattcacttaccagttggctagttgggccagagccatattcgattctgactttatacg 51745
Query: 241 ctttacccttttgtaaagtaacagtcttggtcttttcaatggtaccggcaccgaaacaga 300
|||||||||||||| |||||||||||| ||||||||| ||||||| |||||||||||||
Sbjct: 51744 atttacccttttgtagagtaacagtcttagtcttttcattggtaccagcaccgaaacaga 51685
Query: 301 aatcaccactgacttggcccttcctctgatcaatcaataattcgtcgtctaagtacaaaa 360
| |||||| | ||| || ||| ||||||||||||||||||| || || |||||||| |
Sbjct: 51684 atccaccacgggtttgacctttcttctgatcaatcaataattcttcatccaagtacaata 51625
Query: 361 caccggtaccgaaaacctgcaaaccaaatatgtagtcggcatcttcttcaggagtgaagt 420
||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 51624 gaccagtaccgtaaacctgcaaaccaaatatgtagttagcatcttcctcaggagtgaagt 51565
Query: 421 aaccttctaatgtgatgtaaaatattgggttagtggtgtcaattttttcatgcttgadat 480
||||||| | |||||||||||||| ||||||| | ||||||||||| ||||| |||| ||
Sbjct: 51564 aaccttcaagtgtgatgtaaaataatgggttattcgtgtcaattttatcatgtttgaaat 51505
Query: 481 cgaaaagcaagttgaaagagtgtttaaaggtagcaacatggaatggagattcatcctttg 540
||||||| ||||||||||| || ||||| | ||||||||| |||||||||||||||||||
Sbjct: 51504 cgaaaagtaagttgaaagaatgcttaaaagcagcaacatgaaatggagattcatcctttg 51445
Query: 541 ctctcttttcaacgggctcactgtagaaggaaccggtagcacctgcattgtctccctctg 600
||||||||||||| ||||||||||| ||| ||||||||||||||||||| ||||| ||||
Sbjct: 51444 ctctcttttcaactggctcactgtaaaagaaaccggtagcacctgcattatctccttctg 51385
Query: 601 ctggttttgagggatcgactaccagttgctcaattaaattagataaagtcttatgagact 660
|||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 51384 ctggttttgaaggatcaactaccagttgctcaattaaattagataaggtcttatgagact 51325
Query: 661 ctgccccaattgtgtatggtacttctttgcccactttcttaacaatcccttcgtaaggcg 720
||||||||||||| ||||||||||| |||||||||||||| || |||||||||||||| |
Sbjct: 51324 ctgccccaattgtatatggtacttccttgcccactttcttgacgatcccttcgtaaggtg 51265
Query: 721 aaataacatagtaagaattcacggaggcagaaccacctccagaagatgcctttgctttgg 780
|||||||||||||||| |||| || |||||||||||||||||||| |||||||||||||
Sbjct: 51264 aaataacatagtaagagttcatagatgcagaaccacctccagaagaagcctttgctttgg 51205
Query: 781 c 781
|
Sbjct: 51204 c 51204
>3x_Contig1745
Length = 19830
Score = 355 bits (179), Expect = 7e-98
Identities = 374/439 (85%)
Strand = Plus / Plus
Query: 1 gatcgtttgttcttgctggcaacgtcatatcttccctatcatggccctcagattcccatt 60
|||||||||||||| ||||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 123 gatcgtttgttcttcctggcaagatcatatcttccctatcatgaccttcagattcccatt 182
Query: 61 cagcattcaaaccgatgcataaaatggctttatcatgagcggctgcaagctttgctgctt 120
| || |||||||| || |||||||||||||| || ||| | || ||||| |||||||| |
Sbjct: 183 ctgcgttcaaaccaatacataaaatggctttgtcgtgacccgcagcaagttttgctgcct 242
Query: 121 tcttgatttcctcatctgcatcaatagctttggtgacaccaacctgaagagcaccagatc 180
|| ||||||| ||||||||||||||||| |||| |||||||| |||| | | |||||||
Sbjct: 243 tcctgatttcttcatctgcatcaatagccttggcaacaccaacttgaaaaccgccagatc 302
Query: 181 cgaattcactcaccaactcgcttgttggaccagaaccatattcgattctgactttatacg 240
| ||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 303 caaattcactcaccaactcacttgttggaccagaaccgtattcgattctaactttatacg 362
Query: 241 ctttacccttttgtaaagtaacagtcttggtcttttcaatggtaccggcaccgaaacaga 300
||||||||||||| | | | |||||||||||||||||| |||||| |||||||| ||||
Sbjct: 363 ctttacccttttgcagactgacagtcttggtcttttcatcggtaccagcaccgaagcaga 422
Query: 301 aatcaccactgacttggcccttcctctgatcaatcaataattcgtcgtctaagtacaaaa 360
|| |||| |||| | ||| ||||||||| || |||||| || || |||||||| |
Sbjct: 423 aacttccacgagtttggtctttcttctgatcaaccactaattcatcatccaagtacaata 482
Query: 361 caccggtaccgaaaacctgcaaaccaaatatgtagtcggcatcttcttcaggagtgaagt 420
||||| ||| ||||||| ||||| |||| ||||| ||||||||||| |||||| ||||
Sbjct: 483 tgccggtgccgtaaacctgtaaaccgaataggtagttggcatcttctttaggagtaaagt 542
Query: 421 aaccttctaatgtgatgta 439
||||||| | |||||||||
Sbjct: 543 aaccttccagtgtgatgta 561
Score = 181 bits (91), Expect = 3e-45
Identities = 175/203 (86%)
Strand = Plus / Plus
Query: 579 gcacctgcattgtctccctctgctggttttgagggatcgactaccagttgctcaattaaa 638
|||||| |||| ||||| |||||||||||||| ||||| ||||||||||| ||||| |||
Sbjct: 701 gcacctacattatctccttctgctggttttgaaggatctactaccagttgttcaatcaaa 760
Query: 639 ttagataaagtcttatgagactctgccccaattgtgtatggtacttctttgcccactttc 698
|| ||||| ||||||||||| |||||||||| ||| ||||| ||||| ||||| |||||
Sbjct: 761 tttgataaggtcttatgagattctgccccaagtgtatatggaacttccttgccgactttg 820
Query: 699 ttaacaatcccttcgtaaggcgaaataacatagtaagaattcacggaggcagaaccacct 758
||||||||||||||||| || |||||||||||||| |||| || || |||||||||||
Sbjct: 821 ttaacaatcccttcgtatggtgaaataacatagtacgaatgcagagatgcagaaccaccg 880
Query: 759 ccagaagatgcctttgctttggc 781
|| || ||| |||| ||||||||
Sbjct: 881 ccggaggataccttggctttggc 903
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5254
Number of Sequences: 1807
Number of extensions: 5254
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 3
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)